Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Nedd8P29595 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.92□□□□□ -0.66
Nedd8P29595 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.92□□□□□ -0.66
Nedd8P29595 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nedd8P29595 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.92□□□□□ -0.66
Nedd8P29595 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.92□□□□□ -0.66
Nedd8P29595 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nedd8P29595 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nedd8P29595 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.91□□□□□ -0.66
Nedd8P29595 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.91□□□□□ -0.66
Nedd8P29595 Gm11964-201ENSMUST00000120982 444 ntBASIC10.91□□□□□ -0.66
Nedd8P29595 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.91□□□□□ -0.66
Nedd8P29595 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Gm29667-201ENSMUST00000190817 490 ntBASIC10.91□□□□□ -0.66
Nedd8P29595 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.91□□□□□ -0.66
Nedd8P29595 Chchd1-203ENSMUST00000224633 557 ntBASIC10.91□□□□□ -0.66
Nedd8P29595 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nedd8P29595 Gm24526-201ENSMUST00000082921 158 ntBASIC10.91□□□□□ -0.66
Nedd8P29595 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nedd8P29595 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nedd8P29595 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.91□□□□□ -0.66
Nedd8P29595 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.91□□□□□ -0.66
Nedd8P29595 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nedd8P29595 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Nedd8P29595 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nedd8P29595 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.9□□□□□ -0.66
Nedd8P29595 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.9□□□□□ -0.66
Nedd8P29595 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nedd8P29595 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nedd8P29595 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nedd8P29595 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms