Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm6963-201ENSMUST00000147879 379 ntBASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm24845-201ENSMUST00000158034 109 ntBASIC11.03□□□□□ -0.64
Cd40lgP27548 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.03□□□□□ -0.64
Cd40lgP27548 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.03□□□□□ -0.64
Cd40lgP27548 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.03□□□□□ -0.64
Cd40lgP27548 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.03□□□□□ -0.64
Cd40lgP27548 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cd40lgP27548 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cd40lgP27548 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Cd40lgP27548 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cd40lgP27548 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cd40lgP27548 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cd40lgP27548 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.02□□□□□ -0.64
Cd40lgP27548 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cd40lgP27548 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cd40lgP27548 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cd40lgP27548 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cd40lgP27548 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm12015-201ENSMUST00000117065 843 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm14760-201ENSMUST00000121831 999 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm38241-201ENSMUST00000192641 898 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 AA914427-201ENSMUST00000193194 1166 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm42937-201ENSMUST00000197360 752 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm19187-201ENSMUST00000206781 892 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.02□□□□□ -0.65
Cd40lgP27548 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cd40lgP27548 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cd40lgP27548 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Cd40lgP27548 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cd40lgP27548 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms