Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Col8a2P25318 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col8a2P25318 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a2P25318 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.91□□□□□ -0.82
Col8a2P25318 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Gm9062-201ENSMUST00000117712 727 ntBASIC9.91□□□□□ -0.82
Col8a2P25318 Gm15573-201ENSMUST00000119487 540 ntBASIC9.91□□□□□ -0.82
Col8a2P25318 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.91□□□□□ -0.82
Col8a2P25318 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Gm8100-201ENSMUST00000182906 988 ntBASIC9.91□□□□□ -0.82
Col8a2P25318 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.91□□□□□ -0.82
Col8a2P25318 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.91□□□□□ -0.82
Col8a2P25318 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
Col8a2P25318 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Ginm1-202ENSMUST00000065124 300 ntBASIC9.91□□□□□ -0.82
Col8a2P25318 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Col8a2P25318 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Gm10288-201ENSMUST00000084614 537 ntBASIC9.91□□□□□ -0.82
Col8a2P25318 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Mypopos-202ENSMUST00000205975 2321 ntBASIC9.91□□□□□ -0.82
Col8a2P25318 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col8a2P25318 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a2P25318 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Col8a2P25318 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Col8a2P25318 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.9□□□□□ -0.82
Col8a2P25318 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Col8a2P25318 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm11663-201ENSMUST00000117888 290 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.9□□□□□ -0.82
Col8a2P25318 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Gm15432-201ENSMUST00000121106 195 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.9□□□□□ -0.82
Col8a2P25318 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm18367-201ENSMUST00000176139 600 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Col8a2P25318 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm4482-201ENSMUST00000200876 742 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.9□□□□□ -0.82
Col8a2P25318 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Col8a2P25318 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms