Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Gm31326-201ENSMUST00000191856 1048 ntBASIC10.82□□□□□ -0.68
Cbx3P23198 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.82□□□□□ -0.68
Cbx3P23198 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.82□□□□□ -0.68
Cbx3P23198 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.82□□□□□ -0.68
Cbx3P23198 AC122881.1-201ENSMUST00000225757 2695 ntBASIC10.82□□□□□ -0.68
Cbx3P23198 AC115746.1-201ENSMUST00000228949 3617 ntBASIC10.82□□□□□ -0.68
Cbx3P23198 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Togaram2-201ENSMUST00000097284 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.82□□□□□ -0.68
Cbx3P23198 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Cbx3P23198 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Cbx3P23198 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 AC117656.2-201ENSMUST00000224931 2215 ntBASIC10.81□□□□□ -0.68
Cbx3P23198 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.81□□□□□ -0.68
Cbx3P23198 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.81□□□□□ -0.68
Cbx3P23198 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cbx3P23198 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.81□□□□□ -0.68
Cbx3P23198 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.81□□□□□ -0.68
Cbx3P23198 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.81□□□□□ -0.68
Cbx3P23198 Gm11439-201ENSMUST00000118598 409 ntBASIC10.81□□□□□ -0.68
Cbx3P23198 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Cbx3P23198 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Cbx3P23198 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.81□□□□□ -0.68
Cbx3P23198 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.81□□□□□ -0.68
Cbx3P23198 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC10.81□□□□□ -0.68
Cbx3P23198 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cbx3P23198 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cbx3P23198 Syt7-204ENSMUST00000223586 1344 ntBASIC10.81□□□□□ -0.68
Cbx3P23198 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cbx3P23198 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cbx3P23198 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cbx3P23198 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cbx3P23198 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cbx3P23198 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms