Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
BdnfP21237 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.44□□□□□ -0.58
BdnfP21237 Gm37201-201ENSMUST00000191845 523 ntBASIC11.44□□□□□ -0.58
BdnfP21237 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.44□□□□□ -0.58
BdnfP21237 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.44□□□□□ -0.58
BdnfP21237 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.44□□□□□ -0.58
BdnfP21237 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
BdnfP21237 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
BdnfP21237 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
BdnfP21237 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
BdnfP21237 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.43□□□□□ -0.58
BdnfP21237 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.43□□□□□ -0.58
BdnfP21237 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.43□□□□□ -0.58
BdnfP21237 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
BdnfP21237 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Gm13570-201ENSMUST00000140763 309 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.43□□□□□ -0.58
BdnfP21237 Gm27023-201ENSMUST00000182372 285 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.43□□□□□ -0.58
BdnfP21237 Gm38158-201ENSMUST00000194617 339 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.43□□□□□ -0.58
BdnfP21237 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
BdnfP21237 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.43□□□□□ -0.58
BdnfP21237 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
BdnfP21237 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.43□□□□□ -0.58
BdnfP21237 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
BdnfP21237 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.42□□□□□ -0.58
BdnfP21237 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
BdnfP21237 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.42□□□□□ -0.58
BdnfP21237 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.42□□□□□ -0.58
BdnfP21237 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.42□□□□□ -0.58
BdnfP21237 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
BdnfP21237 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC11.42□□□□□ -0.58
BdnfP21237 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Gm5187-201ENSMUST00000117317 991 ntBASIC11.42□□□□□ -0.58
BdnfP21237 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.42□□□□□ -0.58
BdnfP21237 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.42□□□□□ -0.58
BdnfP21237 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.42□□□□□ -0.58
BdnfP21237 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.42□□□□□ -0.58
BdnfP21237 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.42□□□□□ -0.58
BdnfP21237 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.42□□□□□ -0.58
BdnfP21237 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BdnfP21237 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms