Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm43002-201ENSMUST00000200310 155 ntBASIC12.02□□□□□ -0.49
VimP20152 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VimP20152 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VimP20152 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.02□□□□□ -0.49
VimP20152 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.02□□□□□ -0.49
VimP20152 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
VimP20152 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Erich3-203ENSMUST00000189969 3460 ntBASIC12.01□□□□□ -0.49
VimP20152 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.01□□□□□ -0.49
VimP20152 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VimP20152 Gm24830-201ENSMUST00000102024 166 ntBASIC12.01□□□□□ -0.49
VimP20152 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.01□□□□□ -0.49
VimP20152 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
VimP20152 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VimP20152 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.01□□□□□ -0.49
VimP20152 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.01□□□□□ -0.49
VimP20152 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.01□□□□□ -0.49
VimP20152 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.01□□□□□ -0.49
VimP20152 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.01□□□□□ -0.49
VimP20152 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.01□□□□□ -0.49
VimP20152 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Gm26232-201ENSMUST00000083360 166 ntBASIC12.01□□□□□ -0.49
VimP20152 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.01□□□□□ -0.49
VimP20152 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.01□□□□□ -0.49
VimP20152 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VimP20152 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VimP20152 Gm19040-201ENSMUST00000203280 4726 ntBASIC12.01□□□□□ -0.49
VimP20152 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VimP20152 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VimP20152 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12□□□□□ -0.49
VimP20152 Gm14005-209ENSMUST00000224993 1832 ntBASIC12□□□□□ -0.49
VimP20152 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
VimP20152 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12□□□□□ -0.49
VimP20152 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12□□□□□ -0.49
VimP20152 Gm12341-201ENSMUST00000119724 503 ntBASIC12□□□□□ -0.49
VimP20152 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12□□□□□ -0.49
VimP20152 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
VimP20152 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12□□□□□ -0.49
VimP20152 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
VimP20152 Gm27331-201ENSMUST00000183705 60 ntBASIC12□□□□□ -0.49
VimP20152 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12□□□□□ -0.49
VimP20152 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
VimP20152 AC167013.1-201ENSMUST00000228592 202 ntBASIC12□□□□□ -0.49
VimP20152 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
VimP20152 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VimP20152 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms