Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Gm14608-201ENSMUST00000120030 1553 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 Gm11964-201ENSMUST00000120982 444 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Sdc1P18828 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Sdc1P18828 Gm6152-201ENSMUST00000151704 340 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Gm37042-201ENSMUST00000193816 581 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Sdc1P18828 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Sdc1P18828 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Sdc1P18828 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.69□□□□□ -0.86
Sdc1P18828 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sdc1P18828 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.68□□□□□ -0.86
Sdc1P18828 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Sdc1P18828 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Sdc1P18828 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Gm13453-201ENSMUST00000118708 357 ntBASIC9.68□□□□□ -0.86
Sdc1P18828 Gm11597-201ENSMUST00000121423 964 ntBASIC9.68□□□□□ -0.86
Sdc1P18828 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Gm27430-201ENSMUST00000184585 107 ntBASIC9.68□□□□□ -0.86
Sdc1P18828 Gm17837-201ENSMUST00000186435 985 ntBASIC9.68□□□□□ -0.86
Sdc1P18828 Gm18304-201ENSMUST00000189162 546 ntBASIC9.68□□□□□ -0.86
Sdc1P18828 Gm44333-201ENSMUST00000197168 107 ntBASIC9.68□□□□□ -0.86
Sdc1P18828 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Sdc1P18828 Mzt1-203ENSMUST00000227948 952 ntBASIC9.68□□□□□ -0.86
Sdc1P18828 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Sdc1P18828 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.68□□□□□ -0.86
Sdc1P18828 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.68□□□□□ -0.86
Sdc1P18828 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sdc1P18828 AL645783.1-201ENSMUST00000221416 1832 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms