Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.47□□□□□ -0.73
Ccl3P10855 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Ccl3P10855 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.46□□□□□ -0.73
Ccl3P10855 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ccl3P10855 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.46□□□□□ -0.73
Ccl3P10855 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ccl3P10855 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Gm11801-201ENSMUST00000117807 746 ntBASIC10.46□□□□□ -0.73
Ccl3P10855 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.46□□□□□ -0.73
Ccl3P10855 Gm12030-201ENSMUST00000121917 223 ntBASIC10.46□□□□□ -0.73
Ccl3P10855 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.46□□□□□ -0.73
Ccl3P10855 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.46□□□□□ -0.73
Ccl3P10855 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.46□□□□□ -0.73
Ccl3P10855 Gm18059-201ENSMUST00000208073 580 ntBASIC10.46□□□□□ -0.73
Ccl3P10855 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Ccl3P10855 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.46□□□□□ -0.73
Ccl3P10855 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.46□□□□□ -0.73
Ccl3P10855 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ccl3P10855 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Ccl3P10855 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.46□□□□□ -0.73
Ccl3P10855 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ccl3P10855 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Ccl3P10855 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.46□□□□□ -0.74
Ccl3P10855 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Ccl3P10855 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.46□□□□□ -0.74
Ccl3P10855 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.46□□□□□ -0.74
Ccl3P10855 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ccl3P10855 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Ccl3P10855 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ccl3P10855 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ccl3P10855 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ccl3P10855 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ccl3P10855 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ccl3P10855 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.45□□□□□ -0.74
Ccl3P10855 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Ccl3P10855 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.45□□□□□ -0.74
Ccl3P10855 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.45□□□□□ -0.74
Ccl3P10855 Gm7741-201ENSMUST00000181445 989 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Gm6114-201ENSMUST00000182472 968 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ccl3P10855 Gm37826-201ENSMUST00000195329 322 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Gm7504-201ENSMUST00000201449 424 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.45□□□□□ -0.74
Ccl3P10855 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms