Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.35□□□□□ -0.75
UbbP0CG49 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
UbbP0CG49 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
UbbP0CG49 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
UbbP0CG49 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
UbbP0CG49 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Gm11478-201ENSMUST00000117851 599 ntBASIC10.34□□□□□ -0.75
UbbP0CG49 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.34□□□□□ -0.75
UbbP0CG49 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.34□□□□□ -0.75
UbbP0CG49 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.34□□□□□ -0.75
UbbP0CG49 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.34□□□□□ -0.75
UbbP0CG49 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.34□□□□□ -0.75
UbbP0CG49 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
UbbP0CG49 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
UbbP0CG49 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.34□□□□□ -0.75
UbbP0CG49 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
UbbP0CG49 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.34□□□□□ -0.75
UbbP0CG49 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
UbbP0CG49 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
UbbP0CG49 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.33□□□□□ -0.76
UbbP0CG49 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.33□□□□□ -0.76
UbbP0CG49 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
UbbP0CG49 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm12490-201ENSMUST00000120255 560 ntBASIC10.33□□□□□ -0.76
UbbP0CG49 Gm15610-201ENSMUST00000120584 195 ntBASIC10.33□□□□□ -0.76
UbbP0CG49 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm42937-201ENSMUST00000197360 752 ntBASIC10.33□□□□□ -0.76
UbbP0CG49 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
UbbP0CG49 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
UbbP0CG49 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
UbbP0CG49 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
UbbP0CG49 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms