Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
PtcraP0C6B2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Gm45433-201ENSMUST00000209386 247 ntBASIC10.37□□□□□ -0.75
PtcraP0C6B2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.37□□□□□ -0.75
PtcraP0C6B2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
PtcraP0C6B2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PtcraP0C6B2 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.37□□□□□ -0.75
PtcraP0C6B2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Cog3-203ENSMUST00000227473 4197 ntBASIC10.36□□□□□ -0.75
PtcraP0C6B2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.36□□□□□ -0.75
PtcraP0C6B2 Mir7677-201ENSMUST00000184226 67 ntBASIC10.36□□□□□ -0.75
PtcraP0C6B2 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Gm37666-201ENSMUST00000194110 866 ntBASIC10.36□□□□□ -0.75
PtcraP0C6B2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.36□□□□□ -0.75
PtcraP0C6B2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
PtcraP0C6B2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.35□□□□□ -0.75
PtcraP0C6B2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
PtcraP0C6B2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms