Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23218-201ENSMUST00000158124 276 ntBASIC14.03□□□□□ -0.16
Col3a1P08121 Gm17709-201ENSMUST00000174536 1096 ntBASIC14.03□□□□□ -0.16
Col3a1P08121 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.03□□□□□ -0.16
Col3a1P08121 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Col3a1P08121 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col3a1P08121 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col3a1P08121 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col3a1P08121 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Col3a1P08121 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col3a1P08121 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.02□□□□□ -0.16
Col3a1P08121 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col3a1P08121 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col3a1P08121 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col3a1P08121 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col3a1P08121 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col3a1P08121 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.02□□□□□ -0.16
Col3a1P08121 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.02□□□□□ -0.16
Col3a1P08121 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.02□□□□□ -0.16
Col3a1P08121 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.02□□□□□ -0.16
Col3a1P08121 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.02□□□□□ -0.16
Col3a1P08121 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.02□□□□□ -0.16
Col3a1P08121 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.02□□□□□ -0.16
Col3a1P08121 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col3a1P08121 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.02□□□□□ -0.16
Col3a1P08121 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col3a1P08121 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.02□□□□□ -0.16
Col3a1P08121 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.02□□□□□ -0.17
Col3a1P08121 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col3a1P08121 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col3a1P08121 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col3a1P08121 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col3a1P08121 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col3a1P08121 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col3a1P08121 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col3a1P08121 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.02□□□□□ -0.17
Col3a1P08121 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col3a1P08121 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.01□□□□□ -0.17
Col3a1P08121 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Col3a1P08121 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col3a1P08121 Gm16219-201ENSMUST00000120096 274 ntBASIC14.01□□□□□ -0.17
Col3a1P08121 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.01□□□□□ -0.17
Col3a1P08121 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col3a1P08121 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.01□□□□□ -0.17
Col3a1P08121 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC14.01□□□□□ -0.17
Col3a1P08121 Gm3793-201ENSMUST00000204973 672 ntBASIC14.01□□□□□ -0.17
Col3a1P08121 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Gm19091-201ENSMUST00000208120 978 ntBASIC14.01□□□□□ -0.17
Col3a1P08121 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Gm30671-201ENSMUST00000214898 318 ntBASIC14.01□□□□□ -0.17
Col3a1P08121 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.01□□□□□ -0.17
Col3a1P08121 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col3a1P08121 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col3a1P08121 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.01□□□□□ -0.17
Col3a1P08121 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col3a1P08121 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col3a1P08121 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Col3a1P08121 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col3a1P08121 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col3a1P08121 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC14□□□□□ -0.17
Col3a1P08121 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14□□□□□ -0.17
Col3a1P08121 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col3a1P08121 Gm25148-201ENSMUST00000104611 123 ntBASIC14□□□□□ -0.17
Col3a1P08121 Gm14740-201ENSMUST00000118538 1150 ntBASIC14□□□□□ -0.17
Col3a1P08121 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14□□□□□ -0.17
Col3a1P08121 Gm24398-201ENSMUST00000157870 109 ntBASIC14□□□□□ -0.17
Col3a1P08121 Gm6548-201ENSMUST00000167498 1165 ntBASIC14□□□□□ -0.17
Col3a1P08121 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14□□□□□ -0.17
Col3a1P08121 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Col3a1P08121 Gm29410-201ENSMUST00000188383 694 ntBASIC14□□□□□ -0.17
Col3a1P08121 Gm37826-201ENSMUST00000195329 322 ntBASIC14□□□□□ -0.17
Col3a1P08121 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14□□□□□ -0.17
Col3a1P08121 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14□□□□□ -0.17
Col3a1P08121 Gm18561-201ENSMUST00000206027 804 ntBASIC14□□□□□ -0.17
Col3a1P08121 Gm8436-201ENSMUST00000210152 1080 ntBASIC14□□□□□ -0.17
Col3a1P08121 Gm39288-201ENSMUST00000210554 446 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms