Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm8810-201ENSMUST00000172895 754 ntBASIC10.44□□□□□ -0.74
P04224 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.44□□□□□ -0.74
P04224 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.44□□□□□ -0.74
P04224 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.44□□□□□ -0.74
P04224 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.44□□□□□ -0.74
P04224 AC162801.1-201ENSMUST00000220612 198 ntBASIC10.44□□□□□ -0.74
P04224 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
P04224 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
P04224 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
P04224 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P04224 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
P04224 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
P04224 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P04224 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.43□□□□□ -0.74
P04224 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.43□□□□□ -0.74
P04224 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.43□□□□□ -0.74
P04224 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.43□□□□□ -0.74
P04224 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.43□□□□□ -0.74
P04224 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P04224 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
P04224 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.43□□□□□ -0.74
P04224 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Gm11803-201ENSMUST00000119966 444 ntBASIC10.43□□□□□ -0.74
P04224 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.43□□□□□ -0.74
P04224 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
P04224 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P04224 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Gm10146-201ENSMUST00000072739 309 ntBASIC10.43□□□□□ -0.74
P04224 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
P04224 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P04224 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P04224 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.43□□□□□ -0.74
P04224 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.43□□□□□ -0.74
P04224 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P04224 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04224 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
P04224 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.42□□□□□ -0.74
P04224 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.42□□□□□ -0.74
P04224 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
P04224 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.42□□□□□ -0.74
P04224 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
P04224 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
P04224 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.42□□□□□ -0.74
P04224 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Gm24231-201ENSMUST00000104315 133 ntBASIC10.42□□□□□ -0.74
P04224 Gm11918-201ENSMUST00000121660 179 ntBASIC10.42□□□□□ -0.74
P04224 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.42□□□□□ -0.74
P04224 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.42□□□□□ -0.74
P04224 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Gm23984-201ENSMUST00000157139 203 ntBASIC10.42□□□□□ -0.74
P04224 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
P04224 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04224 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.42□□□□□ -0.74
P04224 Gm8515-201ENSMUST00000194852 576 ntBASIC10.42□□□□□ -0.74
P04224 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.42□□□□□ -0.74
P04224 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.42□□□□□ -0.74
P04224 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
P04224 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.42□□□□□ -0.74
P04224 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms