Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm11700-201ENSMUST00000119409 403 ntBASIC11.36□□□□□ -0.59
P04213 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.36□□□□□ -0.59
P04213 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
P04213 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Gm25700-201ENSMUST00000177693 110 ntBASIC11.36□□□□□ -0.59
P04213 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.36□□□□□ -0.59
P04213 Gm32999-201ENSMUST00000192693 562 ntBASIC11.36□□□□□ -0.59
P04213 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
P04213 Gm43962-201ENSMUST00000203898 190 ntBASIC11.36□□□□□ -0.59
P04213 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.36□□□□□ -0.59
P04213 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.36□□□□□ -0.59
P04213 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.36□□□□□ -0.59
P04213 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
P04213 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
P04213 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
P04213 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.36□□□□□ -0.59
P04213 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.36□□□□□ -0.59
P04213 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.36□□□□□ -0.59
P04213 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
P04213 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.35□□□□□ -0.59
P04213 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P04213 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04213 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
P04213 Gm15198-201ENSMUST00000117283 177 ntBASIC11.35□□□□□ -0.59
P04213 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04213 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04213 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.35□□□□□ -0.59
P04213 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.35□□□□□ -0.59
P04213 Gm37259-201ENSMUST00000193903 849 ntBASIC11.35□□□□□ -0.59
P04213 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Gm8956-201ENSMUST00000203939 825 ntBASIC11.35□□□□□ -0.59
P04213 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.35□□□□□ -0.59
P04213 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.35□□□□□ -0.59
P04213 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.35□□□□□ -0.59
P04213 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.35□□□□□ -0.59
P04213 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.35□□□□□ -0.59
P04213 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04213 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P04213 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P04213 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.35□□□□□ -0.59
P04213 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
P04213 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.35□□□□□ -0.59
P04213 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
P04213 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04213 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.35□□□□□ -0.59
P04213 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms