Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm8420-201ENSMUST00000097103 598 ntBASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm4310-201ENSMUST00000177847 889 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm6082-201ENSMUST00000215204 454 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm9797-202ENSMUST00000218003 294 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Olfr582-201ENSMUST00000098212 960 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Igh-VJ558P01758 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Igh-VJ558P01758 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms