Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
ClppO88696 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ClppO88696 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.71□□□□□ -0.53
ClppO88696 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClppO88696 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ClppO88696 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ClppO88696 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
ClppO88696 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ClppO88696 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
ClppO88696 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ClppO88696 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ClppO88696 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.71□□□□□ -0.54
ClppO88696 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
ClppO88696 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ClppO88696 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.71□□□□□ -0.54
ClppO88696 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
ClppO88696 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.71□□□□□ -0.54
ClppO88696 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.7□□□□□ -0.54
ClppO88696 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Gm24934-201ENSMUST00000103764 111 ntBASIC11.7□□□□□ -0.54
ClppO88696 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
ClppO88696 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.7□□□□□ -0.54
ClppO88696 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
ClppO88696 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.7□□□□□ -0.54
ClppO88696 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.7□□□□□ -0.54
ClppO88696 B9d1os-201ENSMUST00000137010 674 ntBASIC11.7□□□□□ -0.54
ClppO88696 Gm5616-201ENSMUST00000165252 384 ntBASIC11.7□□□□□ -0.54
ClppO88696 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
ClppO88696 Gm8741-201ENSMUST00000174736 384 ntBASIC11.7□□□□□ -0.54
ClppO88696 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.7□□□□□ -0.54
ClppO88696 Gm42997-202ENSMUST00000200321 985 ntBASIC11.7□□□□□ -0.54
ClppO88696 Gm45224-201ENSMUST00000208203 414 ntBASIC11.7□□□□□ -0.54
ClppO88696 Gm19994-201ENSMUST00000217086 586 ntBASIC11.7□□□□□ -0.54
ClppO88696 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.7□□□□□ -0.54
ClppO88696 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
ClppO88696 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
ClppO88696 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ClppO88696 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
ClppO88696 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
ClppO88696 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
ClppO88696 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.69□□□□□ -0.54
ClppO88696 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ClppO88696 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ClppO88696 Gm23119-201ENSMUST00000158610 140 ntBASIC11.69□□□□□ -0.54
ClppO88696 Gm37666-201ENSMUST00000194110 866 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms