Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops6O88545 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC14.47□□□□□ -0.09
Cops6O88545 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.47□□□□□ -0.09
Cops6O88545 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cops6O88545 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops6O88545 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops6O88545 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cops6O88545 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cops6O88545 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.46□□□□□ -0.09
Cops6O88545 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Gm26013-201ENSMUST00000104404 119 ntBASIC14.46□□□□□ -0.09
Cops6O88545 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cops6O88545 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.46□□□□□ -0.09
Cops6O88545 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.46□□□□□ -0.09
Cops6O88545 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.46□□□□□ -0.09
Cops6O88545 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Cops6O88545 Gm26047-201ENSMUST00000157308 113 ntBASIC14.46□□□□□ -0.09
Cops6O88545 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cops6O88545 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Gm8492-201ENSMUST00000182375 987 ntBASIC14.46□□□□□ -0.09
Cops6O88545 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC14.46□□□□□ -0.09
Cops6O88545 Gm26047-202ENSMUST00000198840 115 ntBASIC14.46□□□□□ -0.09
Cops6O88545 Gm44315-201ENSMUST00000203041 219 ntBASIC14.46□□□□□ -0.09
Cops6O88545 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.46□□□□□ -0.09
Cops6O88545 Gm5451-201ENSMUST00000080545 579 ntBASIC14.46□□□□□ -0.09
Cops6O88545 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cops6O88545 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cops6O88545 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops6O88545 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops6O88545 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Cops6O88545 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cops6O88545 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Cops6O88545 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Gm11628-201ENSMUST00000117568 171 ntBASIC14.45□□□□□ -0.1
Cops6O88545 Gm9089-201ENSMUST00000122027 526 ntBASIC14.45□□□□□ -0.1
Cops6O88545 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Mir6958-201ENSMUST00000184207 73 ntBASIC14.45□□□□□ -0.1
Cops6O88545 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Gm42518-201ENSMUST00000196277 938 ntBASIC14.45□□□□□ -0.1
Cops6O88545 Gm44158-201ENSMUST00000203881 505 ntBASIC14.45□□□□□ -0.1
Cops6O88545 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cops6O88545 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cops6O88545 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.45□□□□□ -0.1
Cops6O88545 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cops6O88545 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Cops6O88545 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC14.44□□□□□ -0.1
Cops6O88545 Gm11244-201ENSMUST00000121243 237 ntBASIC14.44□□□□□ -0.1
Cops6O88545 Gm16397-201ENSMUST00000122201 494 ntBASIC14.44□□□□□ -0.1
Cops6O88545 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC14.44□□□□□ -0.1
Cops6O88545 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Cops6O88545 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cops6O88545 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms