Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cops4O88544 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.96□□□□□ -0.65
Cops4O88544 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cops4O88544 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cops4O88544 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cops4O88544 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.96□□□□□ -0.65
Cops4O88544 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Cops4O88544 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC10.96□□□□□ -0.65
Cops4O88544 Gm11439-201ENSMUST00000118598 409 ntBASIC10.96□□□□□ -0.65
Cops4O88544 Gm16177-201ENSMUST00000120728 718 ntBASIC10.96□□□□□ -0.65
Cops4O88544 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.96□□□□□ -0.65
Cops4O88544 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.96□□□□□ -0.65
Cops4O88544 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.96□□□□□ -0.65
Cops4O88544 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Gm29127-201ENSMUST00000188304 517 ntBASIC10.96□□□□□ -0.65
Cops4O88544 Gm9136-201ENSMUST00000193368 454 ntBASIC10.96□□□□□ -0.65
Cops4O88544 Gm44958-201ENSMUST00000203734 736 ntBASIC10.96□□□□□ -0.65
Cops4O88544 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cops4O88544 Gm40466-201ENSMUST00000212174 422 ntBASIC10.96□□□□□ -0.65
Cops4O88544 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cops4O88544 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.96□□□□□ -0.65
Cops4O88544 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cops4O88544 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cops4O88544 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.96□□□□□ -0.66
Cops4O88544 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Cops4O88544 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cops4O88544 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.96□□□□□ -0.66
Cops4O88544 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cops4O88544 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cops4O88544 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cops4O88544 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cops4O88544 Btrc-209ENSMUST00000224478 2194 ntBASIC10.96□□□□□ -0.66
Cops4O88544 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cops4O88544 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cops4O88544 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cops4O88544 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cops4O88544 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.96□□□□□ -0.66
Cops4O88544 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.96□□□□□ -0.66
Cops4O88544 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cops4O88544 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.95□□□□□ -0.66
Cops4O88544 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.95□□□□□ -0.66
Cops4O88544 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cops4O88544 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Cops4O88544 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Cops4O88544 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.95□□□□□ -0.66
Cops4O88544 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.95□□□□□ -0.66
Cops4O88544 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.95□□□□□ -0.66
Cops4O88544 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cops4O88544 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.95□□□□□ -0.66
Cops4O88544 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.95□□□□□ -0.66
Cops4O88544 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.95□□□□□ -0.66
Cops4O88544 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cops4O88544 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.95□□□□□ -0.66
Cops4O88544 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cops4O88544 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.95□□□□□ -0.66
Cops4O88544 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cops4O88544 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cops4O88544 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.94□□□□□ -0.66
Cops4O88544 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.94□□□□□ -0.66
Cops4O88544 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cops4O88544 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.94□□□□□ -0.66
Cops4O88544 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms