Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim1O70400 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim1O70400 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.78□□□□□ -0.52
Pdlim1O70400 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim1O70400 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.78□□□□□ -0.52
Pdlim1O70400 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim1O70400 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pdlim1O70400 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim1O70400 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim1O70400 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Pdlim1O70400 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim1O70400 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pdlim1O70400 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.77□□□□□ -0.52
Pdlim1O70400 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm7857-201ENSMUST00000117957 358 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm12196-201ENSMUST00000120954 262 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pdlim1O70400 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm16505-201ENSMUST00000179981 232 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm27341-201ENSMUST00000183570 106 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm2965-201ENSMUST00000198365 343 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.77□□□□□ -0.53
Pdlim1O70400 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.77□□□□□ -0.53
Pdlim1O70400 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.77□□□□□ -0.53
Pdlim1O70400 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim1O70400 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim1O70400 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim1O70400 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim1O70400 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.76□□□□□ -0.53
Pdlim1O70400 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.76□□□□□ -0.53
Pdlim1O70400 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim1O70400 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim1O70400 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms