Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chrna4O70174 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Chrna4O70174 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chrna4O70174 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chrna4O70174 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.98□□□□□ -0.49
Chrna4O70174 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chrna4O70174 Mir877-201ENSMUST00000104738 85 ntBASIC11.98□□□□□ -0.49
Chrna4O70174 Gm11509-201ENSMUST00000117358 325 ntBASIC11.98□□□□□ -0.49
Chrna4O70174 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.98□□□□□ -0.49
Chrna4O70174 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chrna4O70174 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.98□□□□□ -0.49
Chrna4O70174 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.98□□□□□ -0.49
Chrna4O70174 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Gm5705-201ENSMUST00000066241 711 ntBASIC11.98□□□□□ -0.49
Chrna4O70174 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.98□□□□□ -0.49
Chrna4O70174 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chrna4O70174 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.98□□□□□ -0.49
Chrna4O70174 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.98□□□□□ -0.49
Chrna4O70174 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chrna4O70174 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chrna4O70174 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chrna4O70174 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chrna4O70174 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.97□□□□□ -0.49
Chrna4O70174 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.97□□□□□ -0.49
Chrna4O70174 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chrna4O70174 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.97□□□□□ -0.49
Chrna4O70174 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chrna4O70174 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Gm12380-201ENSMUST00000119012 544 ntBASIC11.97□□□□□ -0.49
Chrna4O70174 Gm15808-201ENSMUST00000119046 604 ntBASIC11.97□□□□□ -0.49
Chrna4O70174 Gm14208-201ENSMUST00000119645 678 ntBASIC11.97□□□□□ -0.49
Chrna4O70174 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.97□□□□□ -0.49
Chrna4O70174 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.97□□□□□ -0.49
Chrna4O70174 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Chrna4O70174 Gm6114-201ENSMUST00000182472 968 ntBASIC11.97□□□□□ -0.49
Chrna4O70174 Gm4857-201ENSMUST00000192718 785 ntBASIC11.97□□□□□ -0.49
Chrna4O70174 Gm45186-201ENSMUST00000206874 478 ntBASIC11.97□□□□□ -0.49
Chrna4O70174 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Chrna4O70174 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.97□□□□□ -0.49
Chrna4O70174 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.97□□□□□ -0.49
Chrna4O70174 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.97□□□□□ -0.49
Chrna4O70174 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Chrna4O70174 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.97□□□□□ -0.49
Chrna4O70174 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chrna4O70174 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.96□□□□□ -0.49
Chrna4O70174 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Chrna4O70174 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.96□□□□□ -0.49
Chrna4O70174 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.96□□□□□ -0.49
Chrna4O70174 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.96□□□□□ -0.49
Chrna4O70174 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.96□□□□□ -0.49
Chrna4O70174 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chrna4O70174 Gm15711-201ENSMUST00000118889 535 ntBASIC11.96□□□□□ -0.49
Chrna4O70174 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Chrna4O70174 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms