Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smarce1O54941 Gm9396-201ENSMUST00000076703 567 ntBASIC14.1□□□□□ -0.15
Smarce1O54941 Gm10312-201ENSMUST00000078515 489 ntBASIC14.1□□□□□ -0.15
Smarce1O54941 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.1□□□□□ -0.15
Smarce1O54941 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarce1O54941 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smarce1O54941 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarce1O54941 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smarce1O54941 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarce1O54941 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Smarce1O54941 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm11989-201ENSMUST00000117240 672 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 Gm5187-201ENSMUST00000117317 991 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 Gm11362-201ENSMUST00000118838 850 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 Gm11793-201ENSMUST00000120433 981 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.09□□□□□ -0.15
Smarce1O54941 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm37489-201ENSMUST00000191883 159 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm19309-201ENSMUST00000218295 205 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smarce1O54941 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Smarce1O54941 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Smarce1O54941 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm42463-201ENSMUST00000198041 4886 ntBASIC14.09□□□□□ -0.15
Smarce1O54941 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.09□□□□□ -0.15
Smarce1O54941 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Smarce1O54941 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Smarce1O54941 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC14.08□□□□□ -0.15
Smarce1O54941 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Smarce1O54941 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarce1O54941 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarce1O54941 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Smarce1O54941 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Smarce1O54941 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Smarce1O54941 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Gm14644-201ENSMUST00000116671 647 ntBASIC14.08□□□□□ -0.16
Smarce1O54941 Gm11439-201ENSMUST00000118598 409 ntBASIC14.08□□□□□ -0.16
Smarce1O54941 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.08□□□□□ -0.16
Smarce1O54941 Gm13786-201ENSMUST00000122371 333 ntBASIC14.08□□□□□ -0.16
Smarce1O54941 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smarce1O54941 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Smarce1O54941 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.08□□□□□ -0.16
Smarce1O54941 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smarce1O54941 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Smarce1O54941 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Smarce1O54941 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.08□□□□□ -0.16
Smarce1O54941 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smarce1O54941 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC14.08□□□□□ -0.16
Smarce1O54941 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Smarce1O54941 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms