Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Itgb3O54890 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.59□□□□□ -0.39
Itgb3O54890 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Itgb3O54890 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Itgb3O54890 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Itgb3O54890 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Itgb3O54890 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Itgb3O54890 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Itgb3O54890 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Itgb3O54890 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Itgb3O54890 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 Gm15432-201ENSMUST00000121106 195 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 Gm13263-201ENSMUST00000121271 838 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Gm10051-201ENSMUST00000145209 414 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Itgb3O54890 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.58□□□□□ -0.4
Itgb3O54890 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Gm5714-201ENSMUST00000197343 566 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Itgb3O54890 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Itgb3O54890 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Itgb3O54890 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.58□□□□□ -0.4
Itgb3O54890 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Itgb3O54890 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Itgb3O54890 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.57□□□□□ -0.4
Itgb3O54890 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.57□□□□□ -0.4
Itgb3O54890 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.57□□□□□ -0.4
Itgb3O54890 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.57□□□□□ -0.4
Itgb3O54890 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Itgb3O54890 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.57□□□□□ -0.4
Itgb3O54890 Gm6114-201ENSMUST00000182472 968 ntBASIC12.57□□□□□ -0.4
Itgb3O54890 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Itgb3O54890 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.57□□□□□ -0.4
Itgb3O54890 Gm6450-201ENSMUST00000200896 574 ntBASIC12.57□□□□□ -0.4
Itgb3O54890 Gm8959-201ENSMUST00000213150 571 ntBASIC12.57□□□□□ -0.4
Itgb3O54890 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.57□□□□□ -0.4
Itgb3O54890 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.57□□□□□ -0.4
Itgb3O54890 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Itgb3O54890 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Itgb3O54890 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Itgb3O54890 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Itgb3O54890 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms