Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm13600-201ENSMUST00000117949 744 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm13351-201ENSMUST00000118087 414 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm15617-201ENSMUST00000118973 771 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm4604-201ENSMUST00000025040 390 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcf11G3X9Z4 Gm9244-201ENSMUST00000056767 2129 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Gm18798-201ENSMUST00000187264 1700 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Gm14270-201ENSMUST00000118388 846 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Gm7525-201ENSMUST00000219425 454 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 AC158392.3-201ENSMUST00000224271 1284 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 CT573086.4-201ENSMUST00000226729 342 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Gm10254-201ENSMUST00000052888 867 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Gm42943-201ENSMUST00000199676 3242 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Gm45416-201ENSMUST00000209713 2201 ntBASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcf11G3X9Z4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Gm9133-201ENSMUST00000118289 540 ntBASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Gm18201-201ENSMUST00000174735 875 ntBASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Gm28833-201ENSMUST00000189671 559 ntBASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Gm43671-201ENSMUST00000200422 433 ntBASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Gm42655-201ENSMUST00000202782 1134 ntBASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC17.67■□□□□ 0.42
Pcf11G3X9Z4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms