Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Mir181d-201ENSMUST00000102383 72 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm13351-201ENSMUST00000118087 414 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm12164-201ENSMUST00000121695 551 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm3150-201ENSMUST00000166418 204 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Trav11n-201ENSMUST00000200113 343 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm6855-201ENSMUST00000206307 790 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm6390-201ENSMUST00000215034 589 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm14005-208ENSMUST00000223654 681 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.32□□□□□ -0.12
NpcdF8VQB8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NpcdF8VQB8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm23272-201ENSMUST00000104053 129 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm13117-201ENSMUST00000120894 691 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm4310-201ENSMUST00000177847 889 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm8342-201ENSMUST00000209839 757 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm40879-201ENSMUST00000220759 612 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Paupar-201ENSMUST00000194826 3482 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.31□□□□□ -0.12
NpcdF8VQB8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NpcdF8VQB8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NpcdF8VQB8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NpcdF8VQB8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NpcdF8VQB8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NpcdF8VQB8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NpcdF8VQB8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NpcdF8VQB8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms