Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Gm5449-201ENSMUST00000081132 357 ntBASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Mir326-201ENSMUST00000083637 95 ntBASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC16.44■□□□□ 0.22
Hfm1D3Z4R1 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm6024-201ENSMUST00000117850 1558 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm8302-201ENSMUST00000119217 852 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm13204-201ENSMUST00000120110 821 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm23675-201ENSMUST00000157311 125 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm11942-201ENSMUST00000180255 345 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm37197-201ENSMUST00000195607 401 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm44106-201ENSMUST00000203153 1599 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Gm4903-201ENSMUST00000210462 405 ntBASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hfm1D3Z4R1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Mir432-201ENSMUST00000157230 75 ntBASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Gm37452-201ENSMUST00000194416 1160 ntBASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Gm43506-201ENSMUST00000200675 753 ntBASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Id2-203ENSMUST00000222667 958 ntBASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hfm1D3Z4R1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hfm1D3Z4R1 Gm43275-201ENSMUST00000202053 1020 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms