Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm45500-201ENSMUST00000211676 803 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm40879-201ENSMUST00000220759 612 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.67□□□□□ -0.7
Shank1D3YZU1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Shank1D3YZU1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm15036-201ENSMUST00000118880 400 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm14760-201ENSMUST00000121831 999 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm22442-201ENSMUST00000157256 144 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm3726-201ENSMUST00000203110 785 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm4604-201ENSMUST00000025040 390 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm19587-201ENSMUST00000191395 545 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.66□□□□□ -0.7
Shank1D3YZU1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shank1D3YZU1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.65□□□□□ -0.7
Shank1D3YZU1 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.65□□□□□ -0.7
Shank1D3YZU1 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.65□□□□□ -0.7
Shank1D3YZU1 Gm42816-201ENSMUST00000198433 325 ntBASIC10.65□□□□□ -0.7
Shank1D3YZU1 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.65□□□□□ -0.7
Shank1D3YZU1 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.65□□□□□ -0.7
Shank1D3YZU1 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Shank1D3YZU1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms