Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Gm43520-201ENSMUST00000197996 164 ntBASIC12.39□□□□□ -0.43
Scn1aA2APX8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Gm6108-201ENSMUST00000208365 367 ntBASIC12.39□□□□□ -0.43
Scn1aA2APX8 Gm2517-201ENSMUST00000215651 348 ntBASIC12.39□□□□□ -0.43
Scn1aA2APX8 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.39□□□□□ -0.43
Scn1aA2APX8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn1aA2APX8 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn1aA2APX8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm7150-201ENSMUST00000122032 981 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm15131-201ENSMUST00000119124 595 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm15374-201ENSMUST00000119313 844 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm11244-201ENSMUST00000121243 237 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.38□□□□□ -0.43
Scn1aA2APX8 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn1aA2APX8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Gm5523-201ENSMUST00000180415 997 ntBASIC12.37□□□□□ -0.43
Scn1aA2APX8 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn1aA2APX8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms