Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm42928-201ENSMUST00000197338 3339 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm12133-201ENSMUST00000121775 661 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm5529-201ENSMUST00000165691 891 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 CT010505.2-201ENSMUST00000227918 998 ntBASIC6.08□□□□□ -1.44
Ubr4A2AN08 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Ubr4A2AN08 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm29101-201ENSMUST00000188329 1471 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gzmg-201ENSMUST00000015578 909 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm24992-201ENSMUST00000157412 130 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm44236-201ENSMUST00000204492 513 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Ermard-210ENSMUST00000226599 788 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 AC114585.2-201ENSMUST00000227693 486 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 AC114585.2-203ENSMUST00000228400 339 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm16439-201ENSMUST00000100687 564 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm44460-201ENSMUST00000196179 129 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm34248-201ENSMUST00000200027 474 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm45258-201ENSMUST00000210042 853 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 AC123698.1-201ENSMUST00000227090 402 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm14538-201ENSMUST00000122019 1327 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm12529-201ENSMUST00000119529 268 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm19058-201ENSMUST00000192135 598 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm4120-201ENSMUST00000220456 578 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 AC133517.1-201ENSMUST00000225825 594 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm5706-201ENSMUST00000181525 993 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm28281-201ENSMUST00000185658 187 ntBASIC6.07□□□□□ -1.44
Ubr4A2AN08 Gm5575-201ENSMUST00000190879 398 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms