Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.9□□□□□ -0.5
H2afb2S4R1M3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H2afb2S4R1M3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.9□□□□□ -0.51
H2afb2S4R1M3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.9□□□□□ -0.51
H2afb2S4R1M3 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.9□□□□□ -0.51
H2afb2S4R1M3 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
H2afb2S4R1M3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
H2afb2S4R1M3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
H2afb2S4R1M3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Gm13665-201ENSMUST00000120830 528 ntBASIC11.89□□□□□ -0.51
H2afb2S4R1M3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Gm25668-201ENSMUST00000157700 129 ntBASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H2afb2S4R1M3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Gm26286-201ENSMUST00000104166 134 ntBASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Gm13350-201ENSMUST00000120519 479 ntBASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Gm45224-201ENSMUST00000208203 414 ntBASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.88□□□□□ -0.51
H2afb2S4R1M3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H2afb2S4R1M3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms