Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm6180-201ENSMUST00000065243 498 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube4bQ9ES00 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Gm11918-201ENSMUST00000121660 179 ntBASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ube4bQ9ES00 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Gm12384-201ENSMUST00000119228 919 ntBASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Gm14928-201ENSMUST00000120198 477 ntBASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Gm23984-201ENSMUST00000157139 203 ntBASIC11.4□□□□□ -0.58
Ube4bQ9ES00 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.4□□□□□ -0.58
Ube4bQ9ES00 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.4□□□□□ -0.58
Ube4bQ9ES00 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ube4bQ9ES00 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms