Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Lima1Q9ERG0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm13342-201ENSMUST00000121055 207 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm38002-201ENSMUST00000193255 180 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm38158-201ENSMUST00000194617 339 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm43133-201ENSMUST00000197472 463 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lima1Q9ERG0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lima1Q9ERG0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms