Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Gm22133-201ENSMUST00000102082 109 ntBASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Gm11439-201ENSMUST00000118598 409 ntBASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Gm15711-201ENSMUST00000118889 535 ntBASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Gm5419-201ENSMUST00000119301 527 ntBASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chmp2aQ9DB34 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm15610-201ENSMUST00000120584 195 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm5616-201ENSMUST00000165252 384 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm8741-201ENSMUST00000174736 384 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm28450-201ENSMUST00000187349 638 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm28071-201ENSMUST00000190355 478 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm37666-201ENSMUST00000194110 866 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 AY036118-201ENSMUST00000200021 923 ntBASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chmp2aQ9DB34 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chmp2aQ9DB34 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms