Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Gm26232-201ENSMUST00000083360 166 ntBASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nop56Q9D6Z1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Gm12502-201ENSMUST00000120197 444 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Gm24644-201ENSMUST00000157114 139 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Gm27486-201ENSMUST00000184923 80 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nop56Q9D6Z1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gm44405-201ENSMUST00000198952 126 ntBASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gm6745-201ENSMUST00000199216 526 ntBASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nop56Q9D6Z1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms