Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Chaf1bQ9D0N7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Gm45930-201ENSMUST00000221330 292 ntBASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Chaf1bQ9D0N7 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Gm23912-201ENSMUST00000104687 87 ntBASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Gm13736-201ENSMUST00000119272 253 ntBASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Gm18584-201ENSMUST00000203098 964 ntBASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chaf1bQ9D0N7 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.63
Chaf1bQ9D0N7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chaf1bQ9D0N7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chaf1bQ9D0N7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.15□□□□□ -0.63
Chaf1bQ9D0N7 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.15□□□□□ -0.63
Chaf1bQ9D0N7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chaf1bQ9D0N7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
Chaf1bQ9D0N7 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms