Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ndc80Q9D0F1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm37259-201ENSMUST00000193903 849 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.13□□□□□ -0.47
Ndc80Q9D0F1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm22323-201ENSMUST00000103832 109 ntBASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm13350-201ENSMUST00000120519 479 ntBASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm7584-201ENSMUST00000175829 940 ntBASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.12□□□□□ -0.47
Ndc80Q9D0F1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms