Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Gm17150-201ENSMUST00000165577 381 ntBASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Gm8602-201ENSMUST00000184045 607 ntBASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Gm6546-201ENSMUST00000192096 766 ntBASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trim13Q9CYB0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm17230-201ENSMUST00000171194 3942 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm8131-201ENSMUST00000213783 1570 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm2606-201ENSMUST00000100754 1002 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm12286-201ENSMUST00000119246 1002 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm12201-201ENSMUST00000120657 1234 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm24644-201ENSMUST00000157114 139 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm26927-201ENSMUST00000182385 965 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm27486-201ENSMUST00000184923 80 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm45925-201ENSMUST00000218882 744 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 AC125209.1-201ENSMUST00000225812 766 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm22058-201ENSMUST00000083393 310 ntBASIC11□□□□□ -0.65
Trim13Q9CYB0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11□□□□□ -0.65
Trim13Q9CYB0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trim13Q9CYB0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim13Q9CYB0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim13Q9CYB0 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim13Q9CYB0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim13Q9CYB0 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms