Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ddx47Q9CWX9 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Gm14441-201ENSMUST00000121960 540 ntBASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ddx47Q9CWX9 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.21□□□□□ -0.46
Ddx47Q9CWX9 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ddx47Q9CWX9 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ddx47Q9CWX9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ddx47Q9CWX9 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ddx47Q9CWX9 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Ddx47Q9CWX9 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Ddx47Q9CWX9 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Gm24934-201ENSMUST00000103764 111 ntBASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Gm12091-201ENSMUST00000146791 830 ntBASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Gm9794-201ENSMUST00000202370 423 ntBASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ddx47Q9CWX9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ddx47Q9CWX9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ddx47Q9CWX9 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ddx47Q9CWX9 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ddx47Q9CWX9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms