Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.98□□□□□ -0.17
Smc3Q9CW03 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.98□□□□□ -0.17
Smc3Q9CW03 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Gm13786-201ENSMUST00000122371 333 ntBASIC13.97□□□□□ -0.17
Smc3Q9CW03 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Gm37489-201ENSMUST00000191883 159 ntBASIC13.97□□□□□ -0.17
Smc3Q9CW03 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.97□□□□□ -0.17
Smc3Q9CW03 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.97□□□□□ -0.17
Smc3Q9CW03 Rgr-203ENSMUST00000225070 4704 ntBASIC13.97□□□□□ -0.17
Smc3Q9CW03 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.97□□□□□ -0.17
Smc3Q9CW03 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.97□□□□□ -0.17
Smc3Q9CW03 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smc3Q9CW03 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.97□□□□□ -0.17
Smc3Q9CW03 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Gm37424-201ENSMUST00000191727 561 ntBASIC13.96□□□□□ -0.17
Smc3Q9CW03 Gm18893-201ENSMUST00000198416 943 ntBASIC13.96□□□□□ -0.17
Smc3Q9CW03 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Gm6013-201ENSMUST00000212264 699 ntBASIC13.96□□□□□ -0.17
Smc3Q9CW03 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Gm9823-201ENSMUST00000051212 327 ntBASIC13.96□□□□□ -0.17
Smc3Q9CW03 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.96□□□□□ -0.17
Smc3Q9CW03 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smc3Q9CW03 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.96□□□□□ -0.17
Smc3Q9CW03 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.96□□□□□ -0.18
Smc3Q9CW03 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc3Q9CW03 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Smc3Q9CW03 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Smc3Q9CW03 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.96□□□□□ -0.18
Smc3Q9CW03 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smc3Q9CW03 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Smc3Q9CW03 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms