Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gm6114-201ENSMUST00000182472 968 ntBASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gm38266-201ENSMUST00000194931 421 ntBASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Gzmn-202ENSMUST00000225535 989 ntBASIC13.57□□□□□ -0.24
Trim11Q99PQ2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim11Q99PQ2 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim11Q99PQ2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Rprl1-202ENSMUST00000198476 238 ntBASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Gm45865-201ENSMUST00000211815 945 ntBASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms