Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim33Q99PP7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm15276-201ENSMUST00000145953 498 ntBASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm6963-201ENSMUST00000147879 379 ntBASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 AA914427-201ENSMUST00000193194 1166 ntBASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm38317-201ENSMUST00000195564 343 ntBASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm13097-201ENSMUST00000210722 397 ntBASIC11.91□□□□□ -0.5
Trim33Q99PP7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm6082-201ENSMUST00000215204 454 ntBASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gzmn-202ENSMUST00000225535 989 ntBASIC11.91□□□□□ -0.5
Trim33Q99PP7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.91□□□□□ -0.5
Trim33Q99PP7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim33Q99PP7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm14644-201ENSMUST00000116671 647 ntBASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm25668-201ENSMUST00000157700 129 ntBASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm26083-201ENSMUST00000157904 193 ntBASIC11.9□□□□□ -0.5
Trim33Q99PP7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm6562-201ENSMUST00000221903 464 ntBASIC11.9□□□□□ -0.5
Trim33Q99PP7 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trim33Q99PP7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim33Q99PP7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trim33Q99PP7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim33Q99PP7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trim33Q99PP7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trim33Q99PP7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trim33Q99PP7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms