Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 AC158986.2-201ENSMUST00000227487 618 ntBASIC13.15□□□□□ -0.3
Pcdh15Q99PJ1 AC154213.1-201ENSMUST00000228234 583 ntBASIC13.15□□□□□ -0.3
Pcdh15Q99PJ1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh15Q99PJ1 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh15Q99PJ1 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.15□□□□□ -0.3
Pcdh15Q99PJ1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh15Q99PJ1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdh15Q99PJ1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Gm26174-201ENSMUST00000158415 219 ntBASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Gm42751-201ENSMUST00000198065 559 ntBASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 AC121357.1-201ENSMUST00000227365 608 ntBASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh15Q99PJ1 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Mir6387-201ENSMUST00000184042 108 ntBASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm44740-201ENSMUST00000205603 1614 ntBASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm38192-201ENSMUST00000194364 1847 ntBASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm37723-201ENSMUST00000194480 565 ntBASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Pcdh15Q99PJ1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Mir1249-201ENSMUST00000116791 98 ntBASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 AC174797.2-201ENSMUST00000225835 165 ntBASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Gm6478-201ENSMUST00000099450 742 ntBASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 AC166361.2-201ENSMUST00000219269 1415 ntBASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms