Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Gm5419-201ENSMUST00000119301 527 ntBASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Gm7722-201ENSMUST00000120646 741 ntBASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Gm14441-201ENSMUST00000121960 540 ntBASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Gm19309-201ENSMUST00000218295 205 ntBASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Morn2-202ENSMUST00000227729 656 ntBASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdk5rap3Q99LM2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdk5rap3Q99LM2 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdk5rap3Q99LM2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms