Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.85□□□□□ -0.67
Lims1Q99JW4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.85□□□□□ -0.67
Lims1Q99JW4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.85□□□□□ -0.67
Lims1Q99JW4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gm5187-201ENSMUST00000117317 991 ntBASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gm43118-201ENSMUST00000199149 775 ntBASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gm3961-201ENSMUST00000204425 994 ntBASIC10.85□□□□□ -0.67
Lims1Q99JW4 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.85□□□□□ -0.67
Lims1Q99JW4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.85□□□□□ -0.67
Lims1Q99JW4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Lims1Q99JW4 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Gm14644-201ENSMUST00000116671 647 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Gm11793-201ENSMUST00000120433 981 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Gm13786-201ENSMUST00000122371 333 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Gm7046-201ENSMUST00000221351 977 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.84□□□□□ -0.67
Lims1Q99JW4 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Morn2-202ENSMUST00000227729 656 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Lims1Q99JW4 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.84□□□□□ -0.67
Lims1Q99JW4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Lims1Q99JW4 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Lims1Q99JW4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Lims1Q99JW4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lims1Q99JW4 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms