Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Gm3760-201ENSMUST00000167475 804 ntBASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb3Q91XZ7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm9506-201ENSMUST00000118516 320 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm8062-201ENSMUST00000139696 444 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm17420-201ENSMUST00000164753 153 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm28064-201ENSMUST00000185639 858 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm37845-201ENSMUST00000194977 355 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm40466-201ENSMUST00000212174 422 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Gm25131-201ENSMUST00000082653 151 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb3Q91XZ7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm13392-201ENSMUST00000117708 150 ntBASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb3Q91XZ7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms