Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Gm11700-201ENSMUST00000119409 403 ntBASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Gm17827-201ENSMUST00000211825 742 ntBASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb6Q91XZ4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm11509-201ENSMUST00000117358 325 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm27627-201ENSMUST00000183644 150 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm29615-201ENSMUST00000185371 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm28224-201ENSMUST00000186078 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm29001-201ENSMUST00000186177 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm28292-201ENSMUST00000186593 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm28101-201ENSMUST00000187608 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm29076-201ENSMUST00000187689 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm28302-201ENSMUST00000187931 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm28646-201ENSMUST00000188220 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm28205-201ENSMUST00000189177 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm29032-201ENSMUST00000189797 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm28695-201ENSMUST00000190300 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm37448-201ENSMUST00000192795 697 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm44262-201ENSMUST00000204969 372 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Gm4157-201ENSMUST00000211647 679 ntBASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb6Q91XZ4 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb6Q91XZ4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb6Q91XZ4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms