Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Gm17040-202ENSMUST00000170597 889 ntBASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Gm270-201ENSMUST00000223010 976 ntBASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Gm26448-201ENSMUST00000082446 203 ntBASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rprd1aQ8VDS4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm23200-201ENSMUST00000104379 132 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm27552-201ENSMUST00000183351 62 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm27844-201ENSMUST00000183613 62 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.28□□□□□ -0.44
Rprd1aQ8VDS4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms