Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Gm44262-201ENSMUST00000204969 372 ntBASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Top1mtQ8R4U6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 AY036118-201ENSMUST00000200021 923 ntBASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Gm5705-201ENSMUST00000066241 711 ntBASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Gm18986-201ENSMUST00000216029 1986 ntBASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Top1mtQ8R4U6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Top1mtQ8R4U6 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Gm11660-201ENSMUST00000120955 412 ntBASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Gm26083-201ENSMUST00000157904 193 ntBASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Gm27627-201ENSMUST00000183644 150 ntBASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Gm17827-201ENSMUST00000211825 742 ntBASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Top1mtQ8R4U6 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms