Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 AC154239.3-201ENSMUST00000226933 674 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm6091-201ENSMUST00000098307 165 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Nup35Q8R4R6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm11700-201ENSMUST00000119409 403 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm11591-201ENSMUST00000120063 702 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm1335-201ENSMUST00000121653 386 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm29649-201ENSMUST00000185649 419 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm37201-201ENSMUST00000191845 523 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Gm7561-201ENSMUST00000211203 886 ntBASIC9.68□□□□□ -0.86
Nup35Q8R4R6 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Nup35Q8R4R6 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nup35Q8R4R6 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms