Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim29Q8R2Q0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim29Q8R2Q0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim29Q8R2Q0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim29Q8R2Q0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim29Q8R2Q0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Gm9136-201ENSMUST00000193368 454 ntBASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Gm5455-201ENSMUST00000058710 715 ntBASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.59□□□□□ -0.23
Trim29Q8R2Q0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim29Q8R2Q0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Gm13350-201ENSMUST00000120519 479 ntBASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Gm4607-201ENSMUST00000206649 577 ntBASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim29Q8R2Q0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Gm37259-201ENSMUST00000193903 849 ntBASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim29Q8R2Q0 Gm19287-201ENSMUST00000203190 358 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms