Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Syne4Q8CII8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Gm7504-201ENSMUST00000201449 424 ntBASIC13.43□□□□□ -0.26
Syne4Q8CII8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Gm45500-201ENSMUST00000211676 803 ntBASIC13.43□□□□□ -0.26
Syne4Q8CII8 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.43□□□□□ -0.26
Syne4Q8CII8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.43□□□□□ -0.26
Syne4Q8CII8 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.43□□□□□ -0.26
Syne4Q8CII8 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.43□□□□□ -0.26
Syne4Q8CII8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.43□□□□□ -0.26
Syne4Q8CII8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Gm44152-201ENSMUST00000205007 1691 ntBASIC13.43□□□□□ -0.26
Syne4Q8CII8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Syne4Q8CII8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm15036-201ENSMUST00000118880 400 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm22379-201ENSMUST00000157480 131 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm44647-201ENSMUST00000207402 428 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.42□□□□□ -0.26
Syne4Q8CII8 Gm18041-201ENSMUST00000218210 618 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.42□□□□□ -0.26
Syne4Q8CII8 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms