Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Gm11700-201ENSMUST00000119409 403 ntBASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc28aQ8CEI3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gm6114-201ENSMUST00000182472 968 ntBASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gm7653-201ENSMUST00000214567 508 ntBASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ccdc28aQ8CEI3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Gm14832-201ENSMUST00000121289 322 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28aQ8CEI3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms